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Stigler Lab - Publications

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ISWI catalyzes nucleosome sliding in condensed nucleosome arrays.
Vizjak P, Kamp D, Hepp N, Scacchetti A, Gonzalez Pisfil M, Bartho J, Halic M, Becker PB, Smolle M, Stigler J*, Mueller-Planitz F*.
Nature Structural & Molecular Biology. 2024. DOI: 10.1038/s41594-024-01290-x

Single-molecule imaging reveals a direct role of CTCF’s zinc fingers in SA interaction and cluster-dependent RNA recruitment.
Huber J, Tanasie N-L, Zernia S, Stigler J.
Nuclear Acids Research. 2024. DOI: 10.1093/nar/gkae391



DNA curtains for studying phase separation mechanisms of DNA-organizing proteins.
Zernia S, Stigler J.
Methods in Cell Biology. 2023. DOI: 10.1016/bs.mcb.2023.02.006



Stabilization of DNA fork junctions by Smc5/6 complexes revealed by single-molecule imaging.
Tanasie N-L, Gutierrez-Escribano P, Jaklin S, Padovani F, Aragon L, Stigler J.
Cell Rep. 2022 Dec 6;41(10):111778. Link

Single-molecule experiments reveal the elbow as an essential folding guide in SMC coiled-coil arms.
Freitag M, Jaklin S, Padovani F, Radzichevici E, Zernia S, Schmoller KM, Stigler J.
Biophys J. 2022 Oct 14:S0006-3495(22)00855-4. doi: 10.1016/j.bpj.2022.10.017. Link

Unraveling the Mechanics of a Repeat-Protein Nanospring: From Folding of Individual Repeats to Fluctuations of the Superhelix.
Synakewicz M, Eapen RS, Perez-Riba A, Rowling PJE, Bauer D, Weißl A, Fischer G, Hyvönen M, Rief M, Itzhaki LS, Stigler J.
ACS Nano. 2022 Mar 8. doi: 10.1021/acsnano.1c09162.



Identification and correction of miscalibration artifacts based on force noise for optical tweezers experiments. Freitag M, Kamp D, Synakewicz M, Stigler J.
J Chem Phys. 155, 175101 (2021). doi:10.1063/5.0063690. Link



Slow Transition Path Times Reveal a Complex Folding Barrier in a Designed Protein. Mehlich A, Fang J, Pelz B, Li H, Stigler J.
Front Chem
. 8, 1309–11 (2020). doi:10.3389/fchem.2020.587824. Link

Benefits and constrains of covalency: the role of loop length in protein stability and ligand binding. Linse S, Thulin E, Nilsson H, Stigler J.
Scientific Reports
1–9 (2020). doi:10.1038/s41598-020-76598-xA. Link



A conserved ATP- and Scc2/4-dependent activity for cohesin in tethering DNA molecules. Gutierrez-Escribano P, Newton MD, Llauró A, Huber J, Tanasie L, Davy J, Aly I, Aramayo R, Montoya A, Kramer H, Stigler J*, Rueda DS*, Aragon L*.
Science Advances
. 5, eaay6804 (2019) doi : 10.1126/sciadv.aay6804. Link



A folding nucleus and minimal ATP binding domain of Hsp70 identified by single-molecule force spectroscopy.
Bauer D, Meinhold S, Jakob RP, Stigler J, Merkel U, Maier T, Rief M, Žoldák G.
Proc Natl Acad Sci U S A. 13, 201716899–6 (2018). doi: 10.1073/pnas.1716899115. [Epub ahead of print] PubMed



Single-Molecule Imaging Reveals a Collapsed Conformational State for DNA-Bound Cohesin.
Stigler J, Çamdere GÖ, Koshland DE, Greene EC.
Cell Rep
. 2016 May 3;15(5):988-998. doi: 10.1016/j.celrep.2016.04.003. Epub 2016 Apr 21. PubMed



Ligand-induced changes of the apparent transition-state position in mechanical protein unfolding.
Stigler J, Rief M.
Biophys J
. 2015 Jul 21;109(2):365-72. doi: 10.1016/j.bpj.2015.06.009. PubMed



Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments.
Ramm B, Stigler J, Hinczewski M, Thirumalai D, Herrmann H, Woehlke G, Rief M.
Proc Natl Acad Sci U S A
. 2014 Aug 5;111(31):11359-64. doi: 10.1073/pnas.1403122111. Epub 2014 Jul 21. PubMed



Ultrafast folding kinetics and cooperativity of villin headpiece in single-molecule force spectroscopy.
Žoldák G, Stigler J, Pelz B, Li H, Rief M.
Proc Natl Acad Sci U S A
. 2013 Nov 5;110(45):18156-61. doi: 10.1073/pnas.1311495110. Epub 2013 Oct 21. PubMed



Dynamic force sensing of filamin revealed in single-molecule experiments.
Rognoni L, Stigler J, Pelz B, Ylänne J, Rief M.
Proc Natl Acad Sci U S A. 2012 Nov 27;109(48):19679-84. doi: 10.1073/pnas.1211274109. Epub 2012 Nov 13. PubMed

Calcium-dependent folding of single calmodulin molecules.
Stigler J
, Rief M.
Proc Natl Acad Sci U S A
. 2012 Oct 30;109(44):17814-9. doi: 10.1073/pnas.1201801109. Epub 2012 Jul 2. PubMed

Hidden Markov analysis of trajectories in single-molecule experiments and the effects of missed events.
Stigler J, Rief M.
. 2012 Mar;13(4):1079-86. doi: 10.1002/cphc.201100814. Epub 2012 Mar 5. PubMed



The complex folding network of single calmodulin molecules.
Stigler J, Ziegler F, Gieseke A, Gebhardt JC, Rief M.
. 2011 Oct 28;334(6055):512-6. doi: 10.1126/science.1207598. PubMed

The evolution of the protein corona around nanoparticles: a test study.
Lundqvist M, Stigler J, Cedervall T, Berggård T, Flanagan MB, Lynch I, Elia G, Dawson K.
ACS Nano
. 2011 Sep 27;5(9):7503-9. doi: 10.1021/nn202458g. Epub 2011 Aug 26. PubMed


Nanoparticle size and surface properties determine the protein corona with possible implications for biological impacts.
Lundqvist M, Stigler J, Elia G, Lynch I, Cedervall T, Dawson KA.
Proc Natl Acad Sci U S A
. 2008 Sep 23;105(38):14265-70. doi: 10.1073/pnas.0805135105. Epub 2008 Sep 22. PubMed